Outline

• Getting started with BioEnergeticFoodWebs
• Installing julia
• Installing BioEnergeticFoodWebs
• Keeping up to date
• Citing the package
• Generating random networks
• Niche model
• First simulation
• Contributing to the package
• Reporting issues
• Adding code and features
• Extinctions
• Rewiring parameters
• References
• Temperature dependence
• Temperature dependence for biological rates
• Temperature dependence for body sizes
• References

Library Outline

• Public Documentation
• Contents
• Index
• Setting up simulations
• Generating networks
• Simulating and saving the output
• Analysis of output
• Internal Documentation
• Contents
• Index
• Functions and methods for networks
• ODE wrappers and functions for integration
• Functions to work on output
• Functions to prepare and check parameters

Index

Functions

• BioEnergeticFoodWebs.foodweb_evenness
• BioEnergeticFoodWebs.nichemodel
• BioEnergeticFoodWebs.population_biomass
• BioEnergeticFoodWebs.population_stability
• BioEnergeticFoodWebs.simulate
• BioEnergeticFoodWebs.species_persistence
• BioEnergeticFoodWebs.species_richness
• BioEnergeticFoodWebs.total_biomass
• BioEnergeticFoodWebs.check_food_web
• BioEnergeticFoodWebs.check_initial_parameters
• BioEnergeticFoodWebs.check_parameters
• BioEnergeticFoodWebs.coefficient_of_variation
• BioEnergeticFoodWebs.connectance
• BioEnergeticFoodWebs.dBdt
• BioEnergeticFoodWebs.distance_to_producer
• BioEnergeticFoodWebs.growthrate
• BioEnergeticFoodWebs.model_parameters
• BioEnergeticFoodWebs.shannon
• BioEnergeticFoodWebs.trophic_rank