Reading local GBIF data

using SpeciesDistributionToolkit
using CairoMakie

In addition to downloading GBIF data, we can work with locally downloaded GBIF files in either Darwin Core or Simple formats.

Getting data from a local file

In this example, we will get data from a local copy of this GBIF data download, which aggregates known occurrenes of Cardinalis cardinalis in the country of Belize.

records = GBIF.localarchive("0069567-260226173443078.zip")

Occurrences(Occurrence[Occurrence("Cardinalis cardinalis (Linnaeus, 1758)", true, (-88.529, 17.76867), DateTime("2009-03-25T00:00:00")), Occurrence("Cardinalis cardinalis (Linnaeus, 1758)", true, (-88.53427, 17.771248), DateTime("2011-12-27T00:00:00")), Occurrence("Cardinalis cardinalis (Linnaeus, 1758)", true, (-88.53427, 17.771248), DateTime("2000-03-11T00:00:00")), Occurrence("Cardinalis cardinalis (Linnaeus, 1758)", true, (-88.615036, 17.873577), DateTime("2000-03-13T00:00:00")), Occurrence("Cardinalis cardinalis (Linnaeus, 1758)", true, (-88.63518, 17.764206), DateTime("2000-03-12T00:00:00")), Occurrence("Cardinalis cardinalis (Linnaeus, 1758)", true, (-88.53427, 17.771248), DateTime("2010-01-12T00:00:00")), Occurrence("Cardinalis cardinalis (Linnaeus, 1758)", true, (-88.53427, 17.771248), DateTime("2011-01-22T00:00:00")), Occurrence("Cardinalis cardinalis (Linnaeus, 1758)", true, (-88.53427, 17.771248), DateTime("2013-12-26T00:00:00")), Occurrence("Cardinalis cardinalis (Linnaeus, 1758)", true, (-88.53427, 17.771248), DateTime("2013-09-20T00:00:00")), Occurrence("Cardinalis cardinalis (Linnaeus, 1758)", true, (-88.53427, 17.771248), DateTime("2013-12-26T00:00:00")), Occurrence("Cardinalis cardinalis (Linnaeus, 1758)", true, (-88.40497, 17.479322), DateTime("2013-11-10T00:00:00")), Occurrence("Cardinalis cardinalis (Linnaeus, 1758)", true, (-88.40497, 17.479322), DateTime("2013-11-10T00:00:00")), Occurrence("Cardinalis cardinalis (Linnaeus, 1758)", true, (-88.53427, 17.771248), DateTime("2000-03-27T00:00:00")), Occurrence("Cardinalis cardinalis (Linnaeus, 1758)", true, (-88.53427, 17.771248), DateTime("2012-07-09T00:00:00")), Occurrence("Cardinalis cardinalis (Linnaeus, 1758)", true, (-88.515305, 17.963547), DateTime("2013-01-28T00:00:00")), Occurrence("Cardinalis cardinalis (Linnaeus, 1758)", true, (-88.55814, 18.102507), DateTime("2013-09-01T00:00:00")), Occurrence("Cardinalis cardinalis (Linnaeus, 1758)", true, (-88.53427, 17.771248), DateTime("2009-01-30T00:00:00")), Occurrence("Cardinalis cardinalis (Linnaeus, 1758)", true, (-88.57178, 17.744762), DateTime("1993-02-26T00:00:00")), Occurrence("Cardinalis cardinalis (Linnaeus, 1758)", true, (-88.65209, 17.764627), DateTime("2013-03-25T00:00:00")), Occurrence("Cardinalis cardinalis (Linnaeus, 1758)", true, (-88.53427, 17.771248), DateTime("2013-05-17T00:00:00")), Occurrence("Cardinalis cardinalis (Linnaeus, 1758)", true, (-88.53427, 17.771248), DateTime("2013-05-14T00:00:00")), Occurrence("Cardinalis cardinalis (Linnaeus, 1758)", true, (-88.54521, 17.771921), DateTime("2013-03-24T00:00:00")), Occurrence("Cardinalis cardinalis (Linnaeus, 1758)", true, (-88.53427, 17.771248), DateTime("2010-03-08T00:00:00")), Occurrence("Cardinalis cardinalis (Linnaeus, 1758)", true, (-88.53427, 17.771248), DateTime("2013-04-03T00:00:00")), Occurrence("Cardinalis cardinalis (Linnaeus, 1758)", true, (-88.53427, 17.771248), DateTime("2013-02-02T00:00:00")), Occurrence("Cardinalis cardinalis (Linnaeus, 1758)", true, (-88.54521, 17.771921), DateTime("2013-03-24T00:00:00")), Occurrence("Cardinalis cardinalis (Linnaeus, 1758)", true, (-88.54521, 17.771921), DateTime("2013-03-24T00:00:00")), Occurrence("Cardinalis cardinalis (Linnaeus, 1758)", true, (-88.54521, 17.771921), DateTime("2013-03-24T00:00:00")), Occurrence("Cardinalis cardinalis (Linnaeus, 1758)", true, (-88.54521, 17.771921), DateTime("2013-03-24T00:00:00")), Occurrence("Cardinalis cardinalis (Linnaeus, 1758)", true, (-88.53772, 17.742147), DateTime("2013-02-16T00:00:00")), Occurrence("Cardinalis cardinalis (Linnaeus, 1758)", true, (-88.54521, 17.771921), DateTime("2013-03-24T00:00:00")), Occurrence("Cardinalis cardinalis (Linnaeus, 1758)", true, (-88.63518, 17.764206), DateTime("2013-03-23T00:00:00")), Occurrence("Cardinalis cardinalis (Linnaeus, 1758)", true, (-88.53427, 17.771248), DateTime("2013-03-20T00:00:00")), Occurrence("Cardinalis cardinalis (Linnaeus, 1758)", true, (-88.63518, 17.764206), DateTime("2013-03-23T00:00:00")), Occurrence("Cardinalis cardinalis (Linnaeus, 1758)", true, (-88.53427, 17.771248), DateTime("2013-03-20T00:00:00")), Occurrence("Cardinalis cardinalis (Linnaeus, 1758)", true, (-88.53427, 17.771248), DateTime("2013-03-19T00:00:00")), Occurrence("Cardinalis cardinalis (Linnaeus, 1758)", true, (-88.53427, 17.771248), DateTime("2013-03-19T00:00:00")), Occurrence("Cardinalis cardinalis (Linnaeus, 1758)", true, (-88.53427, 17.771248), DateTime("2013-03-06T00:00:00")), Occurrence("Cardinalis cardinalis (Linnaeus, 1758)", true, (-88.53427, 17.771248), DateTime("2000-01-20T00:00:00")), Occurrence("Cardinalis cardinalis (Linnaeus, 1758)", true, (-88.53427, 17.771248), DateTime("2013-02-26T00:00:00")), Occurrence("Cardinalis cardinalis (Linnaeus, 1758)", true, (-88.53427, 17.771248), DateTime("1996-04-24T00:00:00")), Occurrence("Cardinalis cardinalis (Linnaeus, 1758)", true, (-88.19629, 18.205797), DateTime("1993-09-24T00:00:00")), Occurrence("Cardinalis cardinalis (Linnaeus, 1758)", true, (-88.8285, 17.902662), DateTime("2006-08-03T00:00:00")), Occurrence("Cardinalis cardinalis (Linnaeus, 1758)", true, (-88.53427, 17.771248), DateTime("1996-04-22T00:00:00")), Occurrence("Cardinalis cardinalis (Linnaeus, 1758)", true, (-88.53101, 17.769545), DateTime("2013-02-16T00:00:00")), Occurrence("Cardinalis cardinalis (Linnaeus, 1758)", true, (-88.515305, 17.963547), DateTime("2013-01-28T00:00:00")), Occurrence("Cardinalis cardinalis (Linnaeus, 1758)", true, (-88.53148, 17.775377), DateTime("2013-02-07T00:00:00")), Occurrence("Cardinalis cardinalis (Linnaeus, 1758)", true, (-88.54227, 17.35177), DateTime("2013-01-17T00:00:00")), Occurrence("Cardinalis cardinalis (Linnaeus, 1758)", true, (-88.536095, 17.768547), DateTime("2011-02-18T00:00:00")), Occurrence("Cardinalis cardinalis (Linnaeus, 1758)", true, (-88.53427, 17.771248), DateTime("2012-03-11T00:00:00")), Occurrence("Cardinalis cardinalis (Linnaeus, 1758)", true, (-88.579315, 17.76407), DateTime("2012-05-06T00:00:00")), Occurrence("Cardinalis cardinalis (Linnaeus, 1758)", true, (-88.54217, 17.710552), DateTime("2012-01-15T00:00:00")), Occurrence("Cardinalis cardinalis (Linnaeus, 1758)", true, (-88.54217, 17.710552), DateTime("2012-01-24T00:00:00")), Occurrence("Cardinalis cardinalis (Linnaeus, 1758)", true, (-88.53427, 17.771248), DateTime("2012-03-07T00:00:00")), Occurrence("Cardinalis cardinalis (Linnaeus, 1758)", true, (-88.653915, 17.751793), DateTime("2012-03-05T00:00:00")), Occurrence("Cardinalis cardinalis (Linnaeus, 1758)", true, (-88.53427, 17.771248), DateTime("2012-01-17T00:00:00")), Occurrence("Cardinalis cardinalis (Linnaeus, 1758)", true, (-88.53427, 17.771248), DateTime("2012-03-06T00:00:00")), Occurrence("Cardinalis cardinalis (Linnaeus, 1758)", true, (-88.53427, 17.771248), DateTime("2012-03-21T00:00:00")), Occurrence("Cardinalis cardinalis (Linnaeus, 1758)", true, (-88.65209, 17.764627), DateTime("2012-03-24T00:00:00")), Occurrence("Cardinalis cardinalis (Linnaeus, 1758)", true, (-88.65209, 17.764627), DateTime("2012-03-24T00:00:00")), Occurrence("Cardinalis cardinalis (Linnaeus, 1758)", true, (-88.53427, 17.771248), DateTime("2012-12-18T00:00:00")), Occurrence("Cardinalis cardinalis (Linnaeus, 1758)", true, (-88.53427, 17.771248), DateTime("2012-03-25T00:00:00")), Occurrence("Cardinalis cardinalis (Linnaeus, 1758)", true, (-88.54217, 17.710552), DateTime("2012-01-24T00:00:00")), Occurrence("Cardinalis cardinalis (Linnaeus, 1758)", true, (-88.54685, 17.780294), DateTime("2012-03-11T00:00:00")), Occurrence("Cardinalis cardinalis (Linnaeus, 1758)", true, (-88.53427, 17.771248), DateTime("2012-01-08T00:00:00")), Occurrence("Cardinalis cardinalis (Linnaeus, 1758)", true, (-88.53427, 17.771248), DateTime("2012-02-26T00:00:00")), Occurrence("Cardinalis cardinalis (Linnaeus, 1758)", true, (-88.53427, 17.771248), DateTime("2012-02-26T00:00:00")), Occurrence("Cardinalis cardinalis (Linnaeus, 1758)", true, (-88.53427, 17.771248), DateTime("2012-03-11T00:00:00")), Occurrence("Cardinalis cardinalis (Linnaeus, 1758)", true, (-88.25378, 17.540539), DateTime("2012-11-23T00:00:00")), Occurrence("Cardinalis cardinalis (Linnaeus, 1758)", true, (-88.53663, 17.754204), DateTime("2012-12-18T00:00:00")), Occurrence("Cardinalis cardinalis (Linnaeus, 1758)", true, (-88.53427, 17.771248), DateTime("2012-03-21T00:00:00")), Occurrence("Cardinalis cardinalis (Linnaeus, 1758)", true, (-88.54217, 17.710552), DateTime("2012-01-24T00:00:00")), Occurrence("Cardinalis cardinalis (Linnaeus, 1758)", true, (-88.53427, 17.771248), DateTime("2011-05-13T00:00:00")), Occurrence("Cardinalis cardinalis (Linnaeus, 1758)", true, (-88.53427, 17.771248), DateTime("2011-02-10T00:00:00")), Occurrence("Cardinalis cardinalis (Linnaeus, 1758)", true, (-88.53427, 17.771248), DateTime("2009-05-21T00:00:00")), Occurrence("Cardinalis cardinalis (Linnaeus, 1758)", true, (-88.35388, 17.641127), DateTime("2008-12-14T00:00:00")), Occurrence("Cardinalis cardinalis (Linnaeus, 1758)", true, (-88.53427, 17.771248), DateTime("2008-03-18T00:00:00")), Occurrence("Cardinalis cardinalis (Linnaeus, 1758)", true, (-88.53427, 17.771248), DateTime("2008-03-10T00:00:00")), Occurrence("Cardinalis cardinalis (Linnaeus, 1758)", true, (-88.53534, 17.782228), DateTime("2008-01-16T00:00:00")), Occurrence("Cardinalis cardinalis (Linnaeus, 1758)", true, (-88.53534, 17.782228), DateTime("2008-01-18T00:00:00")), Occurrence("Cardinalis cardinalis (Linnaeus, 1758)", true, (-88.53427, 17.771248), DateTime("2008-03-18T00:00:00")), Occurrence("Cardinalis cardinalis (Linnaeus, 1758)", true, (-88.33084, 18.273064), DateTime("2008-06-22T00:00:00")), Occurrence("Cardinalis cardinalis (Linnaeus, 1758)", true, (-88.56864, 17.74466), DateTime("2007-01-18T00:00:00")), Occurrence("Cardinalis cardinalis (Linnaeus, 1758)", true, (-88.57529, 17.725157), DateTime("2008-06-19T00:00:00")), Occurrence("Cardinalis cardinalis (Linnaeus, 1758)", true, (-88.57529, 17.725157), DateTime("2008-06-20T00:00:00")), Occurrence("Cardinalis cardinalis (Linnaeus, 1758)", true, (-88.53427, 17.771248), DateTime("2005-01-16T00:00:00")), Occurrence("Cardinalis cardinalis (Linnaeus, 1758)", true, (-88.35388, 17.641127), DateTime("2005-12-18T00:00:00")), Occurrence("Cardinalis cardinalis (Linnaeus, 1758)", true, (-88.35017, 17.68145), DateTime("2006-12-17T00:00:00")), Occurrence("Cardinalis cardinalis (Linnaeus, 1758)", true, (-88.35388, 17.641127), DateTime("2006-12-17T00:00:00")), Occurrence("Cardinalis cardinalis (Linnaeus, 1758)", true, (-88.30915, 17.654621), DateTime("2006-08-30T00:00:00")), Occurrence("Cardinalis cardinalis (Linnaeus, 1758)", true, (-88.53427, 17.771248), DateTime("2003-03-09T00:00:00")), Occurrence("Cardinalis cardinalis (Linnaeus, 1758)", true, (-88.35388, 17.641127), DateTime("2004-12-19T00:00:00")), Occurrence("Cardinalis cardinalis (Linnaeus, 1758)", true, (-88.53427, 17.771248), DateTime("2001-03-30T00:00:00")), Occurrence("Cardinalis cardinalis (Linnaeus, 1758)", true, (-88.86255, 17.878105), DateTime("2002-03-10T00:00:00")), Occurrence("Cardinalis cardinalis (Linnaeus, 1758)", true, (-88.35388, 17.641127), DateTime("2001-12-16T00:00:00")), Occurrence("Cardinalis cardinalis (Linnaeus, 1758)", true, (-88.53427, 17.771248), DateTime("2001-03-30T00:00:00")), Occurrence("Cardinalis cardinalis (Linnaeus, 1758)", true, (-88.53427, 17.771248), DateTime("2002-03-09T00:00:00")), Occurrence("Cardinalis cardinalis (Linnaeus, 1758)", true, (-88.53534, 17.782228), DateTime("2002-06-05T00:00:00")), Occurrence("Cardinalis cardinalis (Linnaeus, 1758)", true, (-88.30832, 17.586378), DateTime("1999-01-13T00:00:00")), Occurrence("Cardinalis cardinalis (Linnaeus, 1758)", true, (-88.34727, 17.764875), DateTime("1999-05-08T00:00:00")), Occurrence("Cardinalis cardinalis (Linnaeus, 1758)", true, (-88.39581, 18.096027), DateTime("1999-04-01T00:00:00")), Occurrence("Cardinalis cardinalis (Linnaeus, 1758)", true, (-88.529, 17.76867), DateTime("2000-03-19T00:00:00")), Occurrence("Cardinalis cardinalis (Linnaeus, 1758)", true, (-88.653915, 17.751793), DateTime("2000-03-16T00:00:00")), Occurrence("Cardinalis cardinalis (Linnaeus, 1758)", true, (-88.30832, 17.586378), DateTime("1999-04-30T00:00:00")), Occurrence("Cardinalis cardinalis (Linnaeus, 1758)", true, (-88.53534, 17.782228), DateTime("2000-07-06T00:00:00")), Occurrence("Cardinalis cardinalis (Linnaeus, 1758)", true, (-88.425835, 17.669506), DateTime("1999-12-19T00:00:00")), Occurrence("Cardinalis cardinalis (Linnaeus, 1758)", true, (-88.35388, 17.641127), DateTime("2000-12-17T00:00:00")), Occurrence("Cardinalis cardinalis (Linnaeus, 1758)", true, (-88.653915, 17.751793), DateTime("2000-03-16T00:00:00")), Occurrence("Cardinalis cardinalis (Linnaeus, 1758)", true, (-88.53427, 17.771248), DateTime("1999-01-13T00:00:00")), Occurrence("Cardinalis cardinalis (Linnaeus, 1758)", true, (-88.655655, 17.719795), DateTime("2000-02-21T00:00:00")), Occurrence("Cardinalis cardinalis (Linnaeus, 1758)", true, (-88.53534, 17.782228), DateTime("1999-01-12T00:00:00")), Occurrence("Cardinalis cardinalis (Linnaeus, 1758)", true, (-88.4615, 18.0573), DateTime("1999-01-11T00:00:00")), Occurrence("Cardinalis cardinalis (Linnaeus, 1758)", true, (-88.43379, 17.66387), DateTime("1997-12-21T00:00:00")), Occurrence("Cardinalis cardinalis (Linnaeus, 1758)", true, (-88.35388, 17.641127), DateTime("1997-12-21T00:00:00")), Occurrence("Cardinalis cardinalis (Linnaeus, 1758)", true, (-88.45039, 17.272223), DateTime("1997-12-26T00:00:00")), Occurrence("Cardinalis cardinalis (Linnaeus, 1758)", true, (-88.360565, 17.67349), DateTime("1997-10-19T00:00:00")), Occurrence("Cardinalis cardinalis (Linnaeus, 1758)", true, (-88.53427, 17.771248), DateTime("1997-03-22T00:00:00")), Occurrence("Cardinalis cardinalis (Linnaeus, 1758)", true, (-88.53534, 17.782228), DateTime("1997-10-18T00:00:00")), Occurrence("Cardinalis cardinalis (Linnaeus, 1758)", true, (-88.30832, 17.586378), DateTime("1998-08-31T00:00:00")), Occurrence("Cardinalis cardinalis (Linnaeus, 1758)", true, (-88.53427, 17.771248), DateTime("1997-03-23T00:00:00")), Occurrence("Cardinalis cardinalis (Linnaeus, 1758)", true, (-88.51276, 17.961523), DateTime("1998-01-02T00:00:00")), Occurrence("Cardinalis cardinalis (Linnaeus, 1758)", true, (-88.728134, 17.976658), DateTime("1998-09-01T00:00:00")), Occurrence("Cardinalis cardinalis (Linnaeus, 1758)", true, (-88.80421, 17.891155), DateTime("1996-09-20T00:00:00")), Occurrence("Cardinalis cardinalis (Linnaeus, 1758)", true, (-88.54685, 17.780294), DateTime("1996-09-19T00:00:00")), Occurrence("Cardinalis cardinalis (Linnaeus, 1758)", true, (-88.53534, 17.782228), DateTime("1996-09-18T00:00:00")), Occurrence("Cardinalis cardinalis (Linnaeus, 1758)", true, (-88.53427, 17.771248), DateTime("1996-08-26T00:00:00")), Occurrence("Cardinalis cardinalis (Linnaeus, 1758)", true, (-88.39007, 18.400267), DateTime("1996-09-20T00:00:00")), Occurrence("Cardinalis cardinalis (Linnaeus, 1758)", true, (-88.33443, 17.56292), DateTime("1996-09-30T00:00:00")), Occurrence("Cardinalis cardinalis (Linnaeus, 1758)", true, (-88.9679, 17.865265), DateTime("1998-12-29T00:00:00")), Occurrence("Cardinalis cardinalis (Linnaeus, 1758)", true, (-88.541626, 17.357641), DateTime("1997-02-07T00:00:00")), Occurrence("Cardinalis cardinalis (Linnaeus, 1758)", true, (-88.53534, 17.782228), DateTime("1997-01-31T00:00:00")), Occurrence("Cardinalis cardinalis (Linnaeus, 1758)", true, (-88.34727, 17.764875), DateTime("1981-03-19T00:00:00")), Occurrence("Cardinalis cardinalis (Linnaeus, 1758)", true, (-88.30477, 17.542086), DateTime("1981-03-19T00:00:00")), Occurrence("Cardinalis cardinalis (Linnaeus, 1758)", true, (-88.57016, 17.50149), DateTime("1981-03-22T00:00:00")), Occurrence("Cardinalis cardinalis (Linnaeus, 1758)", true, (-88.30477, 17.542086), DateTime("1981-03-20T00:00:00")), Occurrence("Cardinalis cardinalis (Linnaeus, 1758)", true, (-88.53063, 17.768), DateTime("2025-12-22T16:31:00")), Occurrence("Cardinalis cardinalis (Linnaeus, 1758)", true, (-88.534598, 17.769617), DateTime("2015-12-26T17:18:00")), Occurrence("Cardinalis cardinalis (Linnaeus, 1758)", true, (-88.53427, 17.771248), DateTime("2011-02-20T00:00:00")), Occurrence("Cardinalis cardinalis (Linnaeus, 1758)", true, (-88.53427, 17.771248), DateTime("2011-01-05T00:00:00")), Occurrence("Cardinalis cardinalis (Linnaeus, 1758)", true, (-88.53427, 17.771248), DateTime("2011-03-14T00:00:00")), Occurrence("Cardinalis cardinalis (Linnaeus, 1758)", true, (-88.65209, 17.764627), DateTime("2011-12-02T00:00:00")), Occurrence("Cardinalis cardinalis (Linnaeus, 1758)", true, (-88.53427, 17.771248), DateTime("2011-03-13T00:00:00")), Occurrence("Cardinalis cardinalis (Linnaeus, 1758)", true, (-88.557465, 17.700964), DateTime("2011-01-10T00:00:00")), Occurrence("Cardinalis cardinalis (Linnaeus, 1758)", true, (-88.529, 17.76867), DateTime("2011-01-23T00:00:00")), Occurrence("Cardinalis cardinalis (Linnaeus, 1758)", true, (-88.653915, 17.751793), DateTime("2011-12-04T00:00:00")), Occurrence("Cardinalis cardinalis (Linnaeus, 1758)", true, (-88.653915, 17.751793), DateTime("2011-12-04T00:00:00")), Occurrence("Cardinalis cardinalis (Linnaeus, 1758)", true, (-88.9829, 17.901705), DateTime("2011-12-04T00:00:00")), Occurrence("Cardinalis cardinalis (Linnaeus, 1758)", true, (-88.63518, 17.764206), DateTime("2011-03-26T00:00:00")), Occurrence("Cardinalis cardinalis (Linnaeus, 1758)", true, (-88.557465, 17.700964), DateTime("2011-01-10T00:00:00")), Occurrence("Cardinalis cardinalis (Linnaeus, 1758)", true, (-88.53427, 17.771248), DateTime("2011-03-23T00:00:00")), Occurrence("Cardinalis cardinalis (Linnaeus, 1758)", true, (-88.53427, 17.771248), DateTime("2011-01-09T00:00:00")), Occurrence("Cardinalis cardinalis (Linnaeus, 1758)", true, (-88.53427, 17.771248), DateTime("2011-01-09T00:00:00")), Occurrence("Cardinalis cardinalis (Linnaeus, 1758)", true, (-88.53427, 17.771248), DateTime("2011-02-27T00:00:00")), Occurrence("Cardinalis cardinalis (Linnaeus, 1758)", true, (-88.52783, 17.768795), DateTime("2011-01-29T00:00:00")), Occurrence("Cardinalis cardinalis (Linnaeus, 1758)", true, (-88.52783, 17.768795), DateTime("2011-01-29T00:00:00")), Occurrence("Cardinalis cardinalis (Linnaeus, 1758)", true, (-88.65209, 17.764627), DateTime("2011-12-02T00:00:00")), Occurrence("Cardinalis cardinalis (Linnaeus, 1758)", true, (-88.53427, 17.771248), DateTime("2011-03-22T00:00:00")), Occurrence("Cardinalis cardinalis (Linnaeus, 1758)", true, (-88.63518, 17.764206), DateTime("2011-03-26T00:00:00")), Occurrence("Cardinalis cardinalis (Linnaeus, 1758)", true, (-88.53427, 17.771248), DateTime("2011-01-09T00:00:00")), Occurrence("Cardinalis cardinalis (Linnaeus, 1758)", true, (-88.52783, 17.768795), DateTime("2011-01-27T00:00:00")), Occurrence("Cardinalis cardinalis (Linnaeus, 1758)", true, (-88.52783, 17.768795), DateTime("2011-01-27T00:00:00")), Occurrence("Cardinalis 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cardinalis (Linnaeus, 1758)", true, (-88.53427, 17.771248), DateTime("2014-03-10T00:00:00")), Occurrence("Cardinalis cardinalis (Linnaeus, 1758)", true, (-88.567314, 17.731922), DateTime("2014-02-01T00:00:00")), Occurrence("Cardinalis cardinalis (Linnaeus, 1758)", true, (-88.53427, 17.771248), DateTime("2014-03-11T00:00:00")), Occurrence("Cardinalis cardinalis (Linnaeus, 1758)", true, (-88.53427, 17.771248), DateTime("2014-03-09T00:00:00")), Occurrence("Cardinalis cardinalis (Linnaeus, 1758)", true, (-88.53427, 17.771248), DateTime("2014-03-10T00:00:00")), Occurrence("Cardinalis cardinalis (Linnaeus, 1758)", true, (-88.529, 17.76867), DateTime("2014-02-21T00:00:00")), Occurrence("Cardinalis cardinalis (Linnaeus, 1758)", true, (-88.53972, 17.771084), DateTime("2014-02-22T00:00:00")), Occurrence("Cardinalis cardinalis (Linnaeus, 1758)", true, (-88.53972, 17.771084), DateTime("2014-02-22T00:00:00")), Occurrence("Cardinalis cardinalis (Linnaeus, 1758)", true, (-88.56673, 17.332672), DateTime("2014-02-28T00:00:00")), Occurrence("Cardinalis cardinalis (Linnaeus, 1758)", true, (-88.529, 17.76867), DateTime("2014-02-20T00:00:00")), Occurrence("Cardinalis cardinalis (Linnaeus, 1758)", true, (-88.53427, 17.771248), DateTime("2014-02-13T00:00:00")), Occurrence("Cardinalis cardinalis (Linnaeus, 1758)", true, (-88.557465, 17.700964), DateTime("2014-02-14T00:00:00")), Occurrence("Cardinalis cardinalis (Linnaeus, 1758)", true, (-88.53599, 17.791393), DateTime("2014-02-15T00:00:00")), Occurrence("Cardinalis cardinalis (Linnaeus, 1758)", true, (-88.53599, 17.791393), DateTime("2014-02-14T00:00:00")), Occurrence("Cardinalis cardinalis (Linnaeus, 1758)", true, (-88.52195, 17.77517), DateTime("2014-01-23T00:00:00")), Occurrence("Cardinalis cardinalis (Linnaeus, 1758)", true, (-88.35388, 17.641127), DateTime("2014-01-25T00:00:00"))])

Because the function to read from local archives is what makes the download function work internally, the options are the same. Both functions can take a second argument that is a type, allowing to export the occurrences to a CSV.File object. The default is to export them as OccurrencesInterface.Occurrences.

Local files

It is good practice to add the local downloads to .gitignore so they are not re-distributed alongside the code. If you are working from a GBIF dataset, the data can be re-downloaded.

We will now make a map with the number of observations for Cardinalis cardinalis:

Code for the figure

borders = getpolygon(PolygonData(NaturalEarth, Countries))
bbox = SpeciesDistributionToolkit.boundingbox(records; padding = 0.6)
fig = Figure()
ax = Axis(fig[1, 1]; aspect = DataAspect())
poly!(ax, borders; color = :lightgrey)
xlims!(ax, bbox.left, bbox.right)
ylims!(ax, bbox.bottom, bbox.top)
hexbin!(
    ax,
    presences(records),
    bins = 200,
    colormap = :lipari,
    colorscale = log10,
)
lines!(ax, borders; color = :grey)

Getting data as a data frame

It is also possible to request the data as a CSV file:

using DataFrames
import CSV

We can look at the first five rows for this series of records:

first(
    DataFrame(
        GBIF.localarchive("0069567-260226173443078.zip", CSV.File)
    ),
    5
)

5×230 DataFrame

Row	gbifID	accessRights	bibliographicCitation	language	license	modified	publisher	references	rightsHolder	type	institutionID	collectionID	datasetID	institutionCode	collectionCode	datasetName	ownerInstitutionCode	basisOfRecord	informationWithheld	dataGeneralizations	dynamicProperties	occurrenceID	catalogNumber	recordNumber	recordedBy	recordedByID	individualCount	organismQuantity	organismQuantityType	sex	lifeStage	reproductiveCondition	caste	behavior	vitality	establishmentMeans	degreeOfEstablishment	pathway	georeferenceVerificationStatus	occurrenceStatus	preparations	disposition	associatedOccurrences	associatedReferences	associatedSequences	associatedTaxa	otherCatalogNumbers	occurrenceRemarks	organismID	organismName	organismScope	associatedOrganisms	previousIdentifications	organismRemarks	materialEntityID	materialEntityRemarks	verbatimLabel	materialSampleID	eventID	parentEventID	eventType	fieldNumber	eventDate	eventTime	startDayOfYear	endDayOfYear	year	month	day	verbatimEventDate	habitat	samplingProtocol	sampleSizeValue	sampleSizeUnit	samplingEffort	fieldNotes	eventRemarks	locationID	higherGeographyID	higherGeography	continent	waterBody	islandGroup	island	countryCode	stateProvince	county	municipality	locality	verbatimLocality	verbatimElevation	verticalDatum	verbatimDepth	minimumDistanceAboveSurfaceInMeters	maximumDistanceAboveSurfaceInMeters	locationAccordingTo	locationRemarks	decimalLatitude	decimalLongitude	coordinateUncertaintyInMeters	coordinatePrecision	pointRadiusSpatialFit	verbatimCoordinateSystem	verbatimSRS	footprintWKT	footprintSRS	footprintSpatialFit	georeferencedBy	georeferencedDate	georeferenceProtocol	georeferenceSources	georeferenceRemarks	geologicalContextID	earliestEonOrLowestEonothem	latestEonOrHighestEonothem	earliestEraOrLowestErathem	latestEraOrHighestErathem	earliestPeriodOrLowestSystem	latestPeriodOrHighestSystem	earliestEpochOrLowestSeries	latestEpochOrHighestSeries	earliestAgeOrLowestStage	latestAgeOrHighestStage	lowestBiostratigraphicZone	highestBiostratigraphicZone	lithostratigraphicTerms	group	formation	member	bed	identificationID	verbatimIdentification	identificationQualifier	typeStatus	identifiedBy	identifiedByID	dateIdentified	identificationReferences	identificationVerificationStatus	identificationRemarks	taxonID	scientificNameID	acceptedNameUsageID	parentNameUsageID	originalNameUsageID	nameAccordingToID	namePublishedInID	taxonConceptID	scientificName	acceptedNameUsage	parentNameUsage	originalNameUsage	nameAccordingTo	namePublishedIn	namePublishedInYear	higherClassification	kingdom	phylum	class	order	superfamily	family	subfamily	tribe	subtribe	genus	genericName	subgenus	infragenericEpithet	specificEpithet	infraspecificEpithet	cultivarEpithet	taxonRank	verbatimTaxonRank	vernacularName	nomenclaturalCode	taxonomicStatus	nomenclaturalStatus	taxonRemarks	datasetKey	publishingCountry	lastInterpreted	elevation	elevationAccuracy	depth	depthAccuracy	distanceFromCentroidInMeters	issue	taxonomicIssue	nonTaxonomicIssue	mediaType	hasCoordinate	hasGeospatialIssues	taxonKey	acceptedTaxonKey	kingdomKey	phylumKey	classKey	orderKey	superfamilyKey	familyKey	subfamilyKey	tribeKey	subtribeKey	genusKey	subgenusKey	speciesKey	species	acceptedScientificName	verbatimScientificName	typifiedName	protocol	lastParsed	lastCrawled	isInvasive	repatriated	relativeOrganismQuantity	projectId	isSequenced	gbifRegion	publishedByGbifRegion	level0Gid	level0Name	level1Gid	level1Name	level2Gid	level2Name	level3Gid	level3Name	iucnRedListCategory
	Int64	Missing	Missing	Missing	String15	String31?	Missing	String?	String?	Missing	Missing	Missing	Missing	String15?	String31?	String?	Missing	String31	Missing	Missing	String?	String	String15?	Missing	String	Missing	Int64?	Missing	Missing	String7?	String7?	Missing	Missing	String7?	String7?	Missing	Missing	Missing	String31?	String7	String15?	Missing	Missing	Missing	Missing	String?	Missing	String?	Int64?	Missing	Missing	Missing	Missing	Missing	Missing	Missing	Missing	Missing	Missing	Missing	Missing	Missing	String31	String15?	Int64	Int64	Int64	Int64	Int64	String31?	String7?	String7?	Missing	Missing	Missing	Missing	Missing	Missing	Missing	Missing	String15	Missing	Missing	Missing	String3	String15?	Missing	String15?	String?	String?	String3?	Missing	Missing	Missing	Missing	Missing	Missing	Float64	Float64	Float64?	Missing	Missing	Missing	Missing	Missing	Missing	Missing	Missing	Missing	Missing	Missing	Missing	Missing	Missing	Missing	Missing	Missing	Missing	Missing	Missing	Missing	Missing	Missing	Missing	Missing	Missing	Missing	Missing	Missing	Missing	Int64?	String31?	Missing	Missing	String31?	Missing	DateTime?	Missing	String31?	Missing	Int64?	Missing	Missing	Missing	Missing	Missing	Missing	String31?	String	Missing	Missing	Missing	Missing	Missing	Missing	String?	String15	String15	String7	String15	Missing	String15	Missing	Missing	Missing	String15	String15	Missing	Missing	String15	Missing	Missing	String7	Missing	String31?	String7?	String15	Missing	Missing	String	String3	String31	Missing	Missing	Missing	Missing	Float64?	String?	Missing	Missing	String31?	Bool	Bool	Int64	Int64	Int64	Int64	Int64	Int64	Missing	Int64	Missing	Missing	Missing	Int64	Missing	Int64	String31	String	String31	Missing	String15	String31	String31	Missing	Bool	Missing	String?	Bool	String15	String15	String3?	String7?	String7?	String15?	Missing	Missing	Missing	Missing	String3
1	979830997	missing	missing	missing	CC_BY_4_0	missing	missing	missing	missing	missing	missing	missing	missing	CLO	EBIRD	missing	missing	HUMAN_OBSERVATION	missing	missing	missing	URN:catalog:CLO:EBIRD:OBS241805724	OBS241805724	missing	obsr122899	missing	missing	missing	missing	missing	missing	missing	missing	missing	missing	missing	missing	missing	missing	PRESENT	missing	missing	missing	missing	missing	missing	missing	missing	missing	missing	missing	missing	missing	missing	missing	missing	missing	missing	missing	missing	missing	missing	2009-03-25	missing	84	84	2009	3	25	missing	missing	missing	missing	missing	missing	missing	missing	missing	missing	missing	NORTH_AMERICA	missing	missing	missing	BZ	Belize	missing	missing	Crooked Tree Wildlife Sanctuary--Bird's Eye View Lodge	missing	missing	missing	missing	missing	missing	missing	missing	17.7687	-88.529	missing	missing	missing	missing	missing	missing	missing	missing	missing	missing	missing	missing	missing	missing	missing	missing	missing	missing	missing	missing	missing	missing	missing	missing	missing	missing	missing	missing	missing	missing	missing	missing	missing	missing	missing	missing	missing	missing	missing	missing	missing	missing	missing	missing	missing	missing	missing	missing	avibase-avibase-4E74AE22	Cardinalis cardinalis (Linnaeus, 1758)	missing	missing	missing	missing	missing	missing	missing	Animalia	Chordata	Aves	Passeriformes	missing	Cardinalidae	missing	missing	missing	Cardinalis	Cardinalis	missing	missing	cardinalis	missing	missing	SPECIES	missing	Northern Cardinal	missing	ACCEPTED	missing	missing	4fa7b334-ce0d-4e88-aaae-2e0c138d049e	BZ	2025-11-05T07:44:08.424Z	missing	missing	missing	missing	missing	CONTINENT_DERIVED_FROM_COORDINATES;TAXON_CONCEPT_ID_NOT_FOUND	missing	missing	missing	true	false	2490384	2490384	1	44	212	729	missing	9285	missing	missing	missing	3241527	missing	2490384	Cardinalis cardinalis	Cardinalis cardinalis (Linnaeus, 1758)	Cardinalis cardinalis	missing	DWC_ARCHIVE	2025-11-05T07:44:08.424Z	2025-10-29T11:02:38.172Z	missing	false	missing	missing	false	LATIN_AMERICA	LATIN_AMERICA	BLZ	Belize	BLZ.1_1	Belize	missing	missing	missing	missing	LC
2	979683794	missing	missing	missing	CC_BY_4_0	missing	missing	missing	missing	missing	missing	missing	missing	CLO	EBIRD	missing	missing	HUMAN_OBSERVATION	missing	missing	missing	URN:catalog:CLO:EBIRD:OBS240556738	OBS240556738	missing	obsr163389	missing	missing	missing	missing	missing	missing	missing	missing	missing	missing	missing	missing	missing	missing	PRESENT	missing	missing	missing	missing	missing	missing	missing	missing	missing	missing	missing	missing	missing	missing	missing	missing	missing	missing	missing	missing	missing	missing	2011-12-27	missing	361	361	2011	12	27	missing	missing	missing	missing	missing	missing	missing	missing	missing	missing	missing	NORTH_AMERICA	missing	missing	missing	BZ	Belize	missing	missing	Crooked Tree Wildlife Sanctuary	missing	missing	missing	missing	missing	missing	missing	missing	17.7712	-88.5343	missing	missing	missing	missing	missing	missing	missing	missing	missing	missing	missing	missing	missing	missing	missing	missing	missing	missing	missing	missing	missing	missing	missing	missing	missing	missing	missing	missing	missing	missing	missing	missing	missing	missing	missing	missing	missing	missing	missing	missing	missing	missing	missing	missing	missing	missing	missing	missing	avibase-avibase-4E74AE22	Cardinalis cardinalis (Linnaeus, 1758)	missing	missing	missing	missing	missing	missing	missing	Animalia	Chordata	Aves	Passeriformes	missing	Cardinalidae	missing	missing	missing	Cardinalis	Cardinalis	missing	missing	cardinalis	missing	missing	SPECIES	missing	Northern Cardinal	missing	ACCEPTED	missing	missing	4fa7b334-ce0d-4e88-aaae-2e0c138d049e	BZ	2025-11-05T07:41:39.348Z	missing	missing	missing	missing	missing	CONTINENT_DERIVED_FROM_COORDINATES;TAXON_CONCEPT_ID_NOT_FOUND	missing	missing	missing	true	false	2490384	2490384	1	44	212	729	missing	9285	missing	missing	missing	3241527	missing	2490384	Cardinalis cardinalis	Cardinalis cardinalis (Linnaeus, 1758)	Cardinalis cardinalis	missing	DWC_ARCHIVE	2025-11-05T07:41:39.348Z	2025-10-29T11:02:38.172Z	missing	false	missing	missing	false	LATIN_AMERICA	LATIN_AMERICA	BLZ	Belize	BLZ.1_1	Belize	missing	missing	missing	missing	LC
3	979232963	missing	missing	missing	CC_BY_4_0	missing	missing	missing	missing	missing	missing	missing	missing	CLO	EBIRD	missing	missing	HUMAN_OBSERVATION	missing	missing	missing	URN:catalog:CLO:EBIRD:OBS238213420	OBS238213420	missing	obsr7291	missing	2	missing	missing	missing	missing	missing	missing	missing	missing	missing	missing	missing	missing	PRESENT	missing	missing	missing	missing	missing	missing	missing	missing	missing	missing	missing	missing	missing	missing	missing	missing	missing	missing	missing	missing	missing	missing	2000-03-11	missing	71	71	2000	3	11	missing	missing	missing	missing	missing	missing	missing	missing	missing	missing	missing	NORTH_AMERICA	missing	missing	missing	BZ	Belize	missing	missing	Crooked Tree Wildlife Sanctuary	missing	missing	missing	missing	missing	missing	missing	missing	17.7712	-88.5343	missing	missing	missing	missing	missing	missing	missing	missing	missing	missing	missing	missing	missing	missing	missing	missing	missing	missing	missing	missing	missing	missing	missing	missing	missing	missing	missing	missing	missing	missing	missing	missing	missing	missing	missing	missing	missing	missing	missing	missing	missing	missing	missing	missing	missing	missing	missing	missing	avibase-avibase-4E74AE22	Cardinalis cardinalis (Linnaeus, 1758)	missing	missing	missing	missing	missing	missing	missing	Animalia	Chordata	Aves	Passeriformes	missing	Cardinalidae	missing	missing	missing	Cardinalis	Cardinalis	missing	missing	cardinalis	missing	missing	SPECIES	missing	Northern Cardinal	missing	ACCEPTED	missing	missing	4fa7b334-ce0d-4e88-aaae-2e0c138d049e	BZ	2025-11-05T07:40:56.620Z	missing	missing	missing	missing	missing	CONTINENT_DERIVED_FROM_COORDINATES;TAXON_CONCEPT_ID_NOT_FOUND	missing	missing	missing	true	false	2490384	2490384	1	44	212	729	missing	9285	missing	missing	missing	3241527	missing	2490384	Cardinalis cardinalis	Cardinalis cardinalis (Linnaeus, 1758)	Cardinalis cardinalis	missing	DWC_ARCHIVE	2025-11-05T07:40:56.620Z	2025-10-29T11:02:38.172Z	missing	false	missing	missing	false	LATIN_AMERICA	LATIN_AMERICA	BLZ	Belize	BLZ.1_1	Belize	missing	missing	missing	missing	LC
4	979227650	missing	missing	missing	CC_BY_4_0	missing	missing	missing	missing	missing	missing	missing	missing	CLO	EBIRD	missing	missing	HUMAN_OBSERVATION	missing	missing	missing	URN:catalog:CLO:EBIRD:OBS238220449	OBS238220449	missing	obsr7291	missing	1	missing	missing	missing	missing	missing	missing	missing	missing	missing	missing	missing	missing	PRESENT	missing	missing	missing	missing	missing	missing	missing	missing	missing	missing	missing	missing	missing	missing	missing	missing	missing	missing	missing	missing	missing	missing	2000-03-13	missing	73	73	2000	3	13	missing	missing	missing	missing	missing	missing	missing	missing	missing	missing	missing	NORTH_AMERICA	missing	missing	missing	BZ	Orange Walk	missing	missing	New River (waterway)	missing	missing	missing	missing	missing	missing	missing	missing	17.8736	-88.615	missing	missing	missing	missing	missing	missing	missing	missing	missing	missing	missing	missing	missing	missing	missing	missing	missing	missing	missing	missing	missing	missing	missing	missing	missing	missing	missing	missing	missing	missing	missing	missing	missing	missing	missing	missing	missing	missing	missing	missing	missing	missing	missing	missing	missing	missing	missing	missing	avibase-avibase-4E74AE22	Cardinalis cardinalis (Linnaeus, 1758)	missing	missing	missing	missing	missing	missing	missing	Animalia	Chordata	Aves	Passeriformes	missing	Cardinalidae	missing	missing	missing	Cardinalis	Cardinalis	missing	missing	cardinalis	missing	missing	SPECIES	missing	Northern Cardinal	missing	ACCEPTED	missing	missing	4fa7b334-ce0d-4e88-aaae-2e0c138d049e	BZ	2025-11-05T07:39:30.879Z	missing	missing	missing	missing	missing	CONTINENT_DERIVED_FROM_COORDINATES;TAXON_CONCEPT_ID_NOT_FOUND	missing	missing	missing	true	false	2490384	2490384	1	44	212	729	missing	9285	missing	missing	missing	3241527	missing	2490384	Cardinalis cardinalis	Cardinalis cardinalis (Linnaeus, 1758)	Cardinalis cardinalis	missing	DWC_ARCHIVE	2025-11-05T07:39:30.879Z	2025-10-29T11:02:38.172Z	missing	false	missing	missing	false	LATIN_AMERICA	LATIN_AMERICA	BLZ	Belize	BLZ.4_1	Orange Walk	missing	missing	missing	missing	LC
5	979226916	missing	missing	missing	CC_BY_4_0	missing	missing	missing	missing	missing	missing	missing	missing	CLO	EBIRD	missing	missing	HUMAN_OBSERVATION	missing	missing	missing	URN:catalog:CLO:EBIRD:OBS238217677	OBS238217677	missing	obsr7291	missing	1	missing	missing	missing	missing	missing	missing	missing	missing	missing	missing	missing	missing	PRESENT	missing	missing	missing	missing	missing	missing	missing	missing	missing	missing	missing	missing	missing	missing	missing	missing	missing	missing	missing	missing	missing	missing	2000-03-12	missing	72	72	2000	3	12	missing	missing	missing	missing	missing	missing	missing	missing	missing	missing	missing	NORTH_AMERICA	missing	missing	missing	BZ	Orange Walk	missing	missing	Dawson Creek & Lamanai savanna	missing	missing	missing	missing	missing	missing	missing	missing	17.7642	-88.6352	missing	missing	missing	missing	missing	missing	missing	missing	missing	missing	missing	missing	missing	missing	missing	missing	missing	missing	missing	missing	missing	missing	missing	missing	missing	missing	missing	missing	missing	missing	missing	missing	missing	missing	missing	missing	missing	missing	missing	missing	missing	missing	missing	missing	missing	missing	missing	missing	avibase-avibase-4E74AE22	Cardinalis cardinalis (Linnaeus, 1758)	missing	missing	missing	missing	missing	missing	missing	Animalia	Chordata	Aves	Passeriformes	missing	Cardinalidae	missing	missing	missing	Cardinalis	Cardinalis	missing	missing	cardinalis	missing	missing	SPECIES	missing	Northern Cardinal	missing	ACCEPTED	missing	missing	4fa7b334-ce0d-4e88-aaae-2e0c138d049e	BZ	2025-11-05T07:38:27.151Z	missing	missing	missing	missing	missing	CONTINENT_DERIVED_FROM_COORDINATES;TAXON_CONCEPT_ID_NOT_FOUND	missing	missing	missing	true	false	2490384	2490384	1	44	212	729	missing	9285	missing	missing	missing	3241527	missing	2490384	Cardinalis cardinalis	Cardinalis cardinalis (Linnaeus, 1758)	Cardinalis cardinalis	missing	DWC_ARCHIVE	2025-11-05T07:38:27.151Z	2025-10-29T11:02:38.172Z	missing	false	missing	missing	false	LATIN_AMERICA	LATIN_AMERICA	BLZ	Belize	BLZ.4_1	Orange Walk	missing	missing	missing	missing	LC

Related documentation

GBIF.localarchive Function

localarchive(path::AbstractString, ::Type)

Convert a GBIF occurrence archive into an object. This function is equivalent to GBIF.download but works from a local copy of any archive. The second argument is a type, which defaults to Occurrences. Currently, CSV.File is also supported, to read into a DataFrame.

source